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International Letters of Chemistry, Physics and Astronomy
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Comparison of Molecular Docking and Molecular Dynamics Simulations of 1,3-Thiazin-4-One with MDM2 Protein

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Abstract:

The molecular docking and molecular dynamics simulations studies of 1,3–thiazin–4–one derivative with a bonafide oncogene protein MDM2 (PDB ID: 4HBM) was investigated. Both the docking and dynamics simulations were performed in Schrödinger software suite 2014 using Glide and Desmond modules. The results of docking and dynamics were compared to investigate the possible binding modes of the thiazinone derivative with 4HBM. The tested molecule shows critical interactions with the important amino acid His 96 which is necessary for the inhibition of MDM2 in both docking and dynamic studies.

Info:

Periodical:
International Letters of Chemistry, Physics and Astronomy (Volume 60)
Pages:
161-167
DOI:
https://doi.org/10.18052/www.scipress.com/ILCPA.60.161
Citation:
S. A. A. Anand et al., "Comparison of Molecular Docking and Molecular Dynamics Simulations of 1,3-Thiazin-4-One with MDM2 Protein", International Letters of Chemistry, Physics and Astronomy, Vol. 60, pp. 161-167, 2015
Online since:
Sep 2015
Authors:
S. Athavan Alias Anand, C. Loganathan, K. Saravanan, S. Kabilan
Keywords:
Docking, Dynamic Simulations, MDM2, Thiazinone
Export:
RIS, BibTeX, Text
Distribution:
Open Access

Creative Commons License
This work is licensed under a
Creative Commons Attribution 4.0 International License

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